SeqNext is a very powerful and user-friendly software module for mapping, basecalling and variant detection with next-generation sequencing data from all main sequencing platforms.SeqNext offers tools to handle all kinds of pre-capturing/amplification methods and kits.Visualisation of the variants, data exchange and reporting are simple and intuitive.

SeqPatient is a sophisticated software module conceived for the analysis of Sanger sequencing data. The software is structured to support the daily work of molecular biology and diagnostic laboratories. Analysis of genomic DNA and cDNA is possible. A statistical function and internal mutation database supports the decision-making process. Get the maximum output from your data through the robust, secure and professional analysis workflow of this powerful tool.

SeqHLA is a powerful tool for HLA labs utilizing conventionial Sanger sequencing technology to perform HLA typing. Statistical functions, automatic use of all previously made analyses as controls for your actual samples, clear data and result visualisation, availability of HLA databases, different resolution types and many other features make this module a "must have" for HLA laboratories.

SeqNext-HLA is conceived for the easy analysis of next-generation sequencing data obtained from HLA-samples. It is basically an adaptation of the standard SeqNext module for HLA typing applications.

Haplotype(s), allele ambiguities and NMDP codes are listed. Regular updates to the latest HLA database version guarantee up-to-date results.

MLPA® is also the name of our software module designed for MLPA® data analysis. Peak assignment is automated and control settings can be easily configured. You can view both raw data and statistical analysis for each sample. We also offer mix-descriptions as downloads from our website. MLPA® data analysis has never been this easy.


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Recent posters

ESHG, Glasgow, Scotland, June 2015 / Department of Human Genetics, Radboudumc, Nijmegen, The Netherlands / Department of Genome Sciences, University of Washington, Seattle, USA

Molecular Inversion Probe based BRCA1 and BRCA2 re-sequencing in a clinical setting


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JSI medical systems develops and markets software tools and offers related support services for genetic professionals.

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Customer feedback

Guy Froyen, PhD

Jessa Hospital, Hasselt, Belgium

"Compared to the two competitor's software modules, SeqNext from JSI performed best when taking into account the price, detection effeciency, speed, flexibility, robustness, data storage needs and customer service"




Latest version

SeqPilot is now at version 4.2.2. To find more details about new functionalities of specific modules, please visit the Download section.

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